Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cops3O88543 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.37□□□□□ -0.27
Cops3O88543 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cops3O88543 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cops3O88543 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Gm27646-201ENSMUST00000183989 110 ntBASIC13.36□□□□□ -0.27
Cops3O88543 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Gm33142-201ENSMUST00000193913 867 ntBASIC13.36□□□□□ -0.27
Cops3O88543 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.36□□□□□ -0.27
Cops3O88543 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.36□□□□□ -0.27
Cops3O88543 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.36□□□□□ -0.27
Cops3O88543 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cops3O88543 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cops3O88543 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cops3O88543 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cops3O88543 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.36□□□□□ -0.27
Cops3O88543 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops3O88543 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cops3O88543 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Cops3O88543 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.35□□□□□ -0.27
Cops3O88543 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.35□□□□□ -0.27
Cops3O88543 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.35□□□□□ -0.27
Cops3O88543 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.35□□□□□ -0.27
Cops3O88543 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.35□□□□□ -0.27
Cops3O88543 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.35□□□□□ -0.27
Cops3O88543 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cops3O88543 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Cops3O88543 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cops3O88543 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cops3O88543 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cops3O88543 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cops3O88543 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cops3O88543 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.35□□□□□ -0.27
Cops3O88543 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops3O88543 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cops3O88543 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cops3O88543 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Cops3O88543 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.34□□□□□ -0.27
Cops3O88543 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.34□□□□□ -0.27
Cops3O88543 Gm12644-201ENSMUST00000119935 606 ntBASIC13.34□□□□□ -0.27
Cops3O88543 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Gm10499-201ENSMUST00000174094 934 ntBASIC13.34□□□□□ -0.27
Cops3O88543 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.34□□□□□ -0.27
Cops3O88543 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cops3O88543 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.34□□□□□ -0.27
Cops3O88543 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms