Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ubr1O70481 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC19.04■□□□□ 0.64
Ubr1O70481 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC19.04■□□□□ 0.64
Ubr1O70481 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC19.04■□□□□ 0.64
Ubr1O70481 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC19.04■□□□□ 0.64
Ubr1O70481 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC19.04■□□□□ 0.64
Ubr1O70481 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.04■□□□□ 0.64
Ubr1O70481 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.04■□□□□ 0.64
Ubr1O70481 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 AC174678.1-201ENSMUST00000228007 2749 ntBASIC19.04■□□□□ 0.64
Ubr1O70481 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.04■□□□□ 0.64
Ubr1O70481 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
Ubr1O70481 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ubr1O70481 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ubr1O70481 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC19.04■□□□□ 0.64
Ubr1O70481 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.04■□□□□ 0.64
Ubr1O70481 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC19.04■□□□□ 0.64
Ubr1O70481 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC19.04■□□□□ 0.64
Ubr1O70481 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ubr1O70481 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC19.03■□□□□ 0.64
Ubr1O70481 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.03■□□□□ 0.64
Ubr1O70481 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Ubr1O70481 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC19.03■□□□□ 0.64
Ubr1O70481 AC139580.1-202ENSMUST00000223574 928 ntBASIC19.03■□□□□ 0.64
Ubr1O70481 AC102291.3-201ENSMUST00000226566 405 ntBASIC19.03■□□□□ 0.64
Ubr1O70481 Gm14452-201ENSMUST00000118680 1632 ntBASIC19.03■□□□□ 0.64
Ubr1O70481 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubr1O70481 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ubr1O70481 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ubr1O70481 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Ubr1O70481 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ubr1O70481 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC19.02■□□□□ 0.64
Ubr1O70481 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ubr1O70481 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ubr1O70481 Gm14127-201ENSMUST00000117906 678 ntBASIC19.02■□□□□ 0.64
Ubr1O70481 Gm15393-201ENSMUST00000120499 219 ntBASIC19.02■□□□□ 0.64
Ubr1O70481 Ighv5-13-201ENSMUST00000193550 290 ntBASIC19.02■□□□□ 0.64
Ubr1O70481 Gm43433-201ENSMUST00000196573 481 ntBASIC19.02■□□□□ 0.64
Ubr1O70481 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC19.02■□□□□ 0.64
Ubr1O70481 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ubr1O70481 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ubr1O70481 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ubr1O70481 Gm15222-202ENSMUST00000228667 1726 ntBASIC19.02■□□□□ 0.63
Ubr1O70481 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ubr1O70481 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ubr1O70481 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ubr1O70481 Gm12341-201ENSMUST00000119724 503 ntBASIC19.01■□□□□ 0.63
Ubr1O70481 Gm5279-201ENSMUST00000199575 745 ntBASIC19.01■□□□□ 0.63
Ubr1O70481 AC154806.6-201ENSMUST00000228192 202 ntBASIC19.01■□□□□ 0.63
Ubr1O70481 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubr1O70481 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ubr1O70481 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ubr1O70481 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubr1O70481 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ubr1O70481 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ubr1O70481 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubr1O70481 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubr1O70481 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubr1O70481 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ubr1O70481 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ubr1O70481 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubr1O70481 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC19.01■□□□□ 0.63
Ubr1O70481 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC19.01■□□□□ 0.63
Ubr1O70481 Gm7558-201ENSMUST00000193221 1165 ntBASIC19.01■□□□□ 0.63
Ubr1O70481 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ubr1O70481 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ubr1O70481 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubr1O70481 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ubr1O70481 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC19■□□□□ 0.63
Ubr1O70481 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ubr1O70481 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubr1O70481 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19■□□□□ 0.63
Ubr1O70481 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubr1O70481 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms