Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim1O70400 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim1O70400 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Gm11594-201ENSMUST00000122313 162 ntBASIC14.68□□□□□ -0.06
Pdlim1O70400 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.68□□□□□ -0.06
Pdlim1O70400 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdlim1O70400 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.68□□□□□ -0.06
Pdlim1O70400 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.68□□□□□ -0.06
Pdlim1O70400 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.68□□□□□ -0.06
Pdlim1O70400 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdlim1O70400 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pdlim1O70400 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim1O70400 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdlim1O70400 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pdlim1O70400 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim1O70400 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Gm8749-201ENSMUST00000117737 331 ntBASIC14.67□□□□□ -0.06
Pdlim1O70400 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.67□□□□□ -0.06
Pdlim1O70400 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.67□□□□□ -0.06
Pdlim1O70400 Gm20553-201ENSMUST00000204205 844 ntBASIC14.67□□□□□ -0.06
Pdlim1O70400 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.67□□□□□ -0.06
Pdlim1O70400 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Pdlim1O70400 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.67□□□□□ -0.06
Pdlim1O70400 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.67□□□□□ -0.06
Pdlim1O70400 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.67□□□□□ -0.06
Pdlim1O70400 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pdlim1O70400 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pdlim1O70400 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.67□□□□□ -0.06
Pdlim1O70400 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim1O70400 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.66□□□□□ -0.06
Pdlim1O70400 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.66□□□□□ -0.06
Pdlim1O70400 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.66□□□□□ -0.06
Pdlim1O70400 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pdlim1O70400 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pdlim1O70400 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Gm13464-201ENSMUST00000119418 935 ntBASIC14.66□□□□□ -0.06
Pdlim1O70400 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.66□□□□□ -0.06
Pdlim1O70400 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.66□□□□□ -0.06
Pdlim1O70400 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.66□□□□□ -0.06
Pdlim1O70400 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.66□□□□□ -0.06
Pdlim1O70400 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms