Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Pde6dO55057 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Mir1668-201ENSMUST00000184114 107 ntBASIC11.75□□□□□ -0.53
Pde6dO55057 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.75□□□□□ -0.53
Pde6dO55057 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.75□□□□□ -0.53
Pde6dO55057 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.75□□□□□ -0.53
Pde6dO55057 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pde6dO55057 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pde6dO55057 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
Pde6dO55057 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.75□□□□□ -0.53
Pde6dO55057 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.75□□□□□ -0.53
Pde6dO55057 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Pde6dO55057 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Pde6dO55057 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.74□□□□□ -0.53
Pde6dO55057 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Gm8495-201ENSMUST00000188740 694 ntBASIC11.74□□□□□ -0.53
Pde6dO55057 Gm21814-202ENSMUST00000203277 873 ntBASIC11.74□□□□□ -0.53
Pde6dO55057 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.74□□□□□ -0.53
Pde6dO55057 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.74□□□□□ -0.53
Pde6dO55057 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pde6dO55057 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Pde6dO55057 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pde6dO55057 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pde6dO55057 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pde6dO55057 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Pde6dO55057 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Pde6dO55057 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.73□□□□□ -0.53
Pde6dO55057 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.73□□□□□ -0.53
Pde6dO55057 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pde6dO55057 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.73□□□□□ -0.53
Pde6dO55057 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms