Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Smarce1O54941 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smarce1O54941 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarce1O54941 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Smarce1O54941 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smarce1O54941 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Smarce1O54941 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smarce1O54941 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.7■□□□□ 0.42
Smarce1O54941 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Smarce1O54941 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.7■□□□□ 0.42
Smarce1O54941 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.7■□□□□ 0.42
Smarce1O54941 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Smarce1O54941 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.7■□□□□ 0.42
Smarce1O54941 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.7■□□□□ 0.42
Smarce1O54941 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Carlr-201ENSMUST00000181515 2574 ntBASIC17.7■□□□□ 0.42
Smarce1O54941 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.7■□□□□ 0.42
Smarce1O54941 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarce1O54941 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smarce1O54941 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smarce1O54941 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.69■□□□□ 0.42
Smarce1O54941 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Smarce1O54941 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.69■□□□□ 0.42
Smarce1O54941 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.69■□□□□ 0.42
Smarce1O54941 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.69■□□□□ 0.42
Smarce1O54941 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smarce1O54941 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.69■□□□□ 0.42
Smarce1O54941 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarce1O54941 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smarce1O54941 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.68■□□□□ 0.42
Smarce1O54941 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smarce1O54941 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smarce1O54941 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.68■□□□□ 0.42
Smarce1O54941 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.68■□□□□ 0.42
Smarce1O54941 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smarce1O54941 Gm7787-201ENSMUST00000216858 688 ntBASIC17.68■□□□□ 0.42
Smarce1O54941 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Smarce1O54941 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Smarce1O54941 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smarce1O54941 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Smarce1O54941 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarce1O54941 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Smarce1O54941 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms