Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sptlc1O35704 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sptlc1O35704 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sptlc1O35704 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.32■□□□□ 0.2
Sptlc1O35704 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Gm17837-201ENSMUST00000186435 985 ntBASIC16.32■□□□□ 0.2
Sptlc1O35704 Gm28630-201ENSMUST00000187806 498 ntBASIC16.32■□□□□ 0.2
Sptlc1O35704 Gm18766-201ENSMUST00000189811 808 ntBASIC16.32■□□□□ 0.2
Sptlc1O35704 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.32■□□□□ 0.2
Sptlc1O35704 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC16.32■□□□□ 0.2
Sptlc1O35704 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sptlc1O35704 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sptlc1O35704 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sptlc1O35704 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.31■□□□□ 0.2
Sptlc1O35704 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Sptlc1O35704 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sptlc1O35704 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.31■□□□□ 0.2
Sptlc1O35704 Gm18351-201ENSMUST00000188646 883 ntBASIC16.31■□□□□ 0.2
Sptlc1O35704 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.31■□□□□ 0.2
Sptlc1O35704 Gm45574-201ENSMUST00000210921 331 ntBASIC16.31■□□□□ 0.2
Sptlc1O35704 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.31■□□□□ 0.2
Sptlc1O35704 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.31■□□□□ 0.2
Sptlc1O35704 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sptlc1O35704 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.31■□□□□ 0.2
Sptlc1O35704 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sptlc1O35704 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sptlc1O35704 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sptlc1O35704 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.31■□□□□ 0.2
Sptlc1O35704 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.3■□□□□ 0.2
Sptlc1O35704 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.3■□□□□ 0.2
Sptlc1O35704 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Gm13453-201ENSMUST00000118708 357 ntBASIC16.3■□□□□ 0.2
Sptlc1O35704 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.3■□□□□ 0.2
Sptlc1O35704 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.3■□□□□ 0.2
Sptlc1O35704 Gm6888-201ENSMUST00000221983 706 ntBASIC16.3■□□□□ 0.2
Sptlc1O35704 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.3■□□□□ 0.2
Sptlc1O35704 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sptlc1O35704 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.29■□□□□ 0.2
Sptlc1O35704 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms