Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clk4O35493 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.33□□□□□ -0.11
Clk4O35493 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clk4O35493 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clk4O35493 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk4O35493 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clk4O35493 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Clk4O35493 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk4O35493 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk4O35493 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk4O35493 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk4O35493 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Clk4O35493 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.33□□□□□ -0.12
Clk4O35493 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Clk4O35493 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.33□□□□□ -0.12
Clk4O35493 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.33□□□□□ -0.12
Clk4O35493 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.33□□□□□ -0.12
Clk4O35493 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Gm5364-201ENSMUST00000216789 889 ntBASIC14.33□□□□□ -0.12
Clk4O35493 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Clk4O35493 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Clk4O35493 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Clk4O35493 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Clk4O35493 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk4O35493 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.32□□□□□ -0.12
Clk4O35493 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.32□□□□□ -0.12
Clk4O35493 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.32□□□□□ -0.12
Clk4O35493 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.32□□□□□ -0.12
Clk4O35493 Gm9727-201ENSMUST00000161387 555 ntBASIC14.32□□□□□ -0.12
Clk4O35493 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clk4O35493 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clk4O35493 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Clk4O35493 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Clk4O35493 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Clk4O35493 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.32□□□□□ -0.12
Clk4O35493 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clk4O35493 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.32□□□□□ -0.12
Clk4O35493 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.32□□□□□ -0.12
Clk4O35493 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clk4O35493 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Clk4O35493 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk4O35493 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Clk4O35493 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.31□□□□□ -0.12
Clk4O35493 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Clk4O35493 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms