Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.19□□□□□ -0.14
Clk3O35492 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Clk3O35492 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Gm25990-201ENSMUST00000102440 86 ntBASIC14.19□□□□□ -0.14
Clk3O35492 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clk3O35492 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Gm11780-201ENSMUST00000136880 516 ntBASIC14.19□□□□□ -0.14
Clk3O35492 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.19□□□□□ -0.14
Clk3O35492 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clk3O35492 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clk3O35492 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Clk3O35492 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.19□□□□□ -0.14
Clk3O35492 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.19□□□□□ -0.14
Clk3O35492 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Clk3O35492 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Clk3O35492 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.18□□□□□ -0.14
Clk3O35492 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clk3O35492 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Clk3O35492 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Gm7222-201ENSMUST00000117512 906 ntBASIC14.18□□□□□ -0.14
Clk3O35492 Gm13884-201ENSMUST00000118103 829 ntBASIC14.18□□□□□ -0.14
Clk3O35492 Gm7862-201ENSMUST00000121461 292 ntBASIC14.18□□□□□ -0.14
Clk3O35492 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Clk3O35492 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clk3O35492 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.18□□□□□ -0.14
Clk3O35492 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk3O35492 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.18□□□□□ -0.14
Clk3O35492 Gm6089-201ENSMUST00000197666 938 ntBASIC14.18□□□□□ -0.14
Clk3O35492 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.18□□□□□ -0.14
Clk3O35492 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.18□□□□□ -0.14
Clk3O35492 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clk3O35492 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clk3O35492 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clk3O35492 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.18□□□□□ -0.14
Clk3O35492 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk3O35492 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clk3O35492 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clk3O35492 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clk3O35492 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.17□□□□□ -0.14
Clk3O35492 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.17□□□□□ -0.14
Clk3O35492 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.17□□□□□ -0.14
Clk3O35492 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Clk3O35492 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clk3O35492 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.17□□□□□ -0.14
Clk3O35492 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clk3O35492 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.17□□□□□ -0.14
Clk3O35492 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk3O35492 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms