Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.79□□□□□ -0.52
Efnb3O35393 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.79□□□□□ -0.52
Efnb3O35393 Gm27357-201ENSMUST00000183754 135 ntBASIC11.79□□□□□ -0.52
Efnb3O35393 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.79□□□□□ -0.52
Efnb3O35393 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Efnb3O35393 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Efnb3O35393 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.78□□□□□ -0.52
Efnb3O35393 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.78□□□□□ -0.52
Efnb3O35393 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.78□□□□□ -0.52
Efnb3O35393 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Efnb3O35393 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Efnb3O35393 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.78□□□□□ -0.52
Efnb3O35393 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Efnb3O35393 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Efnb3O35393 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.78□□□□□ -0.52
Efnb3O35393 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Efnb3O35393 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.78□□□□□ -0.52
Efnb3O35393 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Efnb3O35393 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Efnb3O35393 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Efnb3O35393 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Efnb3O35393 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Efnb3O35393 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Efnb3O35393 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Efnb3O35393 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Efnb3O35393 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Efnb3O35393 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Efnb3O35393 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Efnb3O35393 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Efnb3O35393 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Efnb3O35393 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Efnb3O35393 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.77□□□□□ -0.53
Efnb3O35393 Rprl3-201ENSMUST00000157400 290 ntBASIC11.77□□□□□ -0.53
Efnb3O35393 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.77□□□□□ -0.53
Efnb3O35393 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Efnb3O35393 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Efnb3O35393 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms