Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Cx3cl1O35188 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Gm43352-201ENSMUST00000196419 3065 ntBASIC14□□□□□ -0.17
Cx3cl1O35188 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cx3cl1O35188 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14□□□□□ -0.17
Cx3cl1O35188 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14□□□□□ -0.17
Cx3cl1O35188 Gm17968-201ENSMUST00000194902 784 ntBASIC14□□□□□ -0.17
Cx3cl1O35188 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14□□□□□ -0.17
Cx3cl1O35188 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14□□□□□ -0.17
Cx3cl1O35188 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14□□□□□ -0.17
Cx3cl1O35188 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cl1O35188 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.99□□□□□ -0.17
Cx3cl1O35188 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Gm2272-201ENSMUST00000194903 582 ntBASIC13.99□□□□□ -0.17
Cx3cl1O35188 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.99□□□□□ -0.17
Cx3cl1O35188 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.99□□□□□ -0.17
Cx3cl1O35188 Gm10175-201ENSMUST00000086013 645 ntBASIC13.99□□□□□ -0.17
Cx3cl1O35188 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cl1O35188 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Gm11594-201ENSMUST00000122313 162 ntBASIC13.98□□□□□ -0.17
Cx3cl1O35188 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Gm44492-201ENSMUST00000197012 141 ntBASIC13.98□□□□□ -0.17
Cx3cl1O35188 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.98□□□□□ -0.17
Cx3cl1O35188 Thap2-203ENSMUST00000218989 527 ntBASIC13.98□□□□□ -0.17
Cx3cl1O35188 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cl1O35188 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cx3cl1O35188 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms