Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gfra3O35118 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Gfra3O35118 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Gfra3O35118 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.87□□□□□ -0.35
Gfra3O35118 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.87□□□□□ -0.35
Gfra3O35118 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.87□□□□□ -0.35
Gfra3O35118 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Gm43767-201ENSMUST00000198933 381 ntBASIC12.87□□□□□ -0.35
Gfra3O35118 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.87□□□□□ -0.35
Gfra3O35118 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 Gm17872-201ENSMUST00000222550 532 ntBASIC12.87□□□□□ -0.35
Gfra3O35118 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.87□□□□□ -0.35
Gfra3O35118 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.87□□□□□ -0.35
Gfra3O35118 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gfra3O35118 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Gfra3O35118 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.86□□□□□ -0.35
Gfra3O35118 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Gfra3O35118 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Gfra3O35118 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gfra3O35118 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Gfra3O35118 Rprl2-201ENSMUST00000157150 290 ntBASIC12.86□□□□□ -0.35
Gfra3O35118 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.86□□□□□ -0.35
Gfra3O35118 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gfra3O35118 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.86□□□□□ -0.35
Gfra3O35118 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gfra3O35118 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Gfra3O35118 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gfra3O35118 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gfra3O35118 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Gfra3O35118 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Gfra3O35118 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gfra3O35118 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gfra3O35118 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.86□□□□□ -0.35
Gfra3O35118 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.86□□□□□ -0.35
Gfra3O35118 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gfra3O35118 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gfra3O35118 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gfra3O35118 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gfra3O35118 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Gfra3O35118 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gfra3O35118 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gfra3O35118 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gfra3O35118 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Gfra3O35118 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gfra3O35118 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gfra3O35118 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gfra3O35118 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms