Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.86■□□□□ 0.45
NpcdF8VQB8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.86■□□□□ 0.45
NpcdF8VQB8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NpcdF8VQB8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NpcdF8VQB8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.84■□□□□ 0.45
NpcdF8VQB8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
NpcdF8VQB8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Gm9002-201ENSMUST00000178437 499 ntBASIC17.84■□□□□ 0.45
NpcdF8VQB8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NpcdF8VQB8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
NpcdF8VQB8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NpcdF8VQB8 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.83■□□□□ 0.45
NpcdF8VQB8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
NpcdF8VQB8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NpcdF8VQB8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Gm3436-201ENSMUST00000179930 840 ntBASIC17.83■□□□□ 0.44
NpcdF8VQB8 Gm43703-201ENSMUST00000200523 763 ntBASIC17.83■□□□□ 0.44
NpcdF8VQB8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.83■□□□□ 0.44
NpcdF8VQB8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
NpcdF8VQB8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NpcdF8VQB8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NpcdF8VQB8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
NpcdF8VQB8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms