Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc71lE9Q4T4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc71lE9Q4T4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Gm44454-201ENSMUST00000198541 138 ntBASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc71lE9Q4T4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms