Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Gm20482-202ENSMUST00000174729 825 ntBASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Gm27320-201ENSMUST00000184892 109 ntBASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Gm37008-201ENSMUST00000195712 319 ntBASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Gm18893-201ENSMUST00000198416 943 ntBASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Gm25732-201ENSMUST00000175168 60 ntBASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Col6a3E9PWQ3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Mir6927-201ENSMUST00000184494 71 ntBASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a3E9PWQ3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gm8810-201ENSMUST00000172895 754 ntBASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Gm8194-201ENSMUST00000159783 859 ntBASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a3E9PWQ3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms