Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Gm23984-201ENSMUST00000157139 203 ntBASIC13.32□□□□□ -0.28
Shank1D3YZU1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Gm18062-201ENSMUST00000208020 547 ntBASIC13.32□□□□□ -0.28
Shank1D3YZU1 Gm18055-201ENSMUST00000208254 547 ntBASIC13.32□□□□□ -0.28
Shank1D3YZU1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Gm9899-201ENSMUST00000065519 555 ntBASIC13.32□□□□□ -0.28
Shank1D3YZU1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shank1D3YZU1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Gm4875-201ENSMUST00000118257 786 ntBASIC13.31□□□□□ -0.28
Shank1D3YZU1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.31□□□□□ -0.28
Shank1D3YZU1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Shank1D3YZU1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.3□□□□□ -0.28
Shank1D3YZU1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms