Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.13□□□□□ -0.63
Col6a5A6H584 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Col6a5A6H584 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Col6a5A6H584 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Col6a5A6H584 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Gm24644-201ENSMUST00000157114 139 ntBASIC11.13□□□□□ -0.63
Col6a5A6H584 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Col6a5A6H584 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Gm43338-201ENSMUST00000198617 2223 ntBASIC11.12□□□□□ -0.63
Col6a5A6H584 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Rps4l-202ENSMUST00000204242 789 ntBASIC11.12□□□□□ -0.63
Col6a5A6H584 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col6a5A6H584 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.12□□□□□ -0.63
Col6a5A6H584 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a5A6H584 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Col6a5A6H584 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.12□□□□□ -0.63
Col6a5A6H584 Gm38002-201ENSMUST00000193255 180 ntBASIC11.12□□□□□ -0.63
Col6a5A6H584 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.12□□□□□ -0.63
Col6a5A6H584 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a5A6H584 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.12□□□□□ -0.63
Col6a5A6H584 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col6a5A6H584 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Col6a5A6H584 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a5A6H584 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a5A6H584 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a5A6H584 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.11□□□□□ -0.63
Col6a5A6H584 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.11□□□□□ -0.63
Col6a5A6H584 Gm5363-201ENSMUST00000211927 938 ntBASIC11.11□□□□□ -0.63
Col6a5A6H584 Cts7-204ENSMUST00000225321 1257 ntBASIC11.11□□□□□ -0.63
Col6a5A6H584 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.11□□□□□ -0.63
Col6a5A6H584 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Gm12997-201ENSMUST00000120207 640 ntBASIC11.11□□□□□ -0.63
Col6a5A6H584 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms