Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5640A3KG49 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm5640A3KG49 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.11■□□□□ 0.01
Gm5640A3KG49 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm5640A3KG49 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Mir770-201ENSMUST00000103252 94 ntBASIC15.11■□□□□ 0.01
Gm5640A3KG49 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Gm7889-201ENSMUST00000185591 958 ntBASIC15.11■□□□□ 0.01
Gm5640A3KG49 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm5640A3KG49 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5640A3KG49 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.11■□□□□ 0.01
Gm5640A3KG49 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.1■□□□□ 0.01
Gm5640A3KG49 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Gm9172-201ENSMUST00000212092 954 ntBASIC15.1■□□□□ 0.01
Gm5640A3KG49 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5640A3KG49 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5640A3KG49 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5640A3KG49 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5640A3KG49 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5640A3KG49 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.09■□□□□ 0.01
Gm5640A3KG49 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5640A3KG49 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5640A3KG49 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.09■□□□□ 0.01
Gm5640A3KG49 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.09■□□□□ 0.01
Gm5640A3KG49 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5640A3KG49 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5640A3KG49 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Gm5640A3KG49 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5640A3KG49 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms