Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd6A3KFM7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd6A3KFM7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Chd6A3KFM7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd6A3KFM7 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.96□□□□□ -0.5
Chd6A3KFM7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd6A3KFM7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd6A3KFM7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd6A3KFM7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.96□□□□□ -0.5
Chd6A3KFM7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gm4909-201ENSMUST00000118749 794 ntBASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gm11793-201ENSMUST00000120433 981 ntBASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.95□□□□□ -0.5
Chd6A3KFM7 Gm24196-201ENSMUST00000179161 110 ntBASIC11.95□□□□□ -0.5
Chd6A3KFM7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd6A3KFM7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Gm9368-201ENSMUST00000219348 831 ntBASIC11.94□□□□□ -0.5
Chd6A3KFM7 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.94□□□□□ -0.5
Chd6A3KFM7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.94□□□□□ -0.5
Chd6A3KFM7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.94□□□□□ -0.5
Chd6A3KFM7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd6A3KFM7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm29310-201ENSMUST00000185468 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21825-201ENSMUST00000185728 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm29109-201ENSMUST00000185895 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21896-201ENSMUST00000186520 696 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms