Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav12d-1A0N8R0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav12d-1A0N8R0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Gm27646-201ENSMUST00000183989 110 ntBASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-1A0N8R0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms