Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm3854A0A1B0GSS6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Syt7-205ENSMUST00000224135 1557 ntBASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm44855-201ENSMUST00000205725 362 ntBASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3854A0A1B0GSS6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Dancr-204ENSMUST00000132389 2347 ntBASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm14719-201ENSMUST00000121891 340 ntBASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm5479-201ENSMUST00000160578 435 ntBASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3854A0A1B0GSS6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm24543-201ENSMUST00000103867 82 ntBASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm9719-201ENSMUST00000162765 543 ntBASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm27680-201ENSMUST00000184192 160 ntBASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm7775-201ENSMUST00000218871 853 ntBASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm3854A0A1B0GSS6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms