Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Mir449b-201ENSMUST00000104833 80 ntBASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.8■□□□□ 0.44
Cfap99A0A140LIX9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap99A0A140LIX9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Gm22175-201ENSMUST00000175007 78 ntBASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Gm27430-201ENSMUST00000184585 107 ntBASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Gm44333-201ENSMUST00000197168 107 ntBASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap99A0A140LIX9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 Gm9385-201ENSMUST00000117563 472 ntBASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 Gm2272-201ENSMUST00000194903 582 ntBASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.77■□□□□ 0.44
Cfap99A0A140LIX9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cfap99A0A140LIX9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms