Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
1700028J19RikA0A0U1RP08 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14□□□□□ -0.17
1700028J19RikA0A0U1RP08 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14□□□□□ -0.17
1700028J19RikA0A0U1RP08 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
1700028J19RikA0A0U1RP08 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
1700028J19RikA0A0U1RP08 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Gm12008-201ENSMUST00000117791 755 ntBASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
1700028J19RikA0A0U1RP08 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms