Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-5A0A075B6B9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm6345-202ENSMUST00000180900 204 ntBASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav6d-5A0A075B6B9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-5A0A075B6B9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms