Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Mir5130-201ENSMUST00000175160 84 ntBASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6-5A0A075B6B5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Gm8344-201ENSMUST00000119813 856 ntBASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Gm20760-201ENSMUST00000179197 648 ntBASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Gm18101-201ENSMUST00000215769 548 ntBASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Gm30025-201ENSMUST00000218555 728 ntBASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6-5A0A075B6B5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms