Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Gm2272-201ENSMUST00000194903 582 ntBASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-4A0A075B6B4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-4A0A075B6B4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-4A0A075B6B4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-4A0A075B6B4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav6-4A0A075B6B4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-4A0A075B6B4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-4A0A075B6B4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trav6-4A0A075B6B4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-4A0A075B6B4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-4A0A075B6B4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-4A0A075B6B4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-4A0A075B6B4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms