Protein–RNA interactions for Protein: A0A075B6B3

Trav6d-3, T cell receptor alpha variable 6D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-3A0A075B6B3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Gm5682-201ENSMUST00000173402 505 ntBASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-3A0A075B6B3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-3A0A075B6B3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-3A0A075B6B3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Ank2-226ENSMUST00000189368 339 ntBASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm43347-201ENSMUST00000200226 580 ntBASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.94□□□□□ -0.5
Trav6d-3A0A075B6B3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms