Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-7A0A075B6B0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-7A0A075B6B0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-7A0A075B6B0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-7A0A075B6B0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-7A0A075B6B0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-7A0A075B6B0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav6d-7A0A075B6B0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6d-7A0A075B6B0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav6d-7A0A075B6B0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm7222-201ENSMUST00000117512 906 ntBASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6d-7A0A075B6B0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms