Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm15165-201ENSMUST00000118140 502 ntBASIC11.85□□□□□ -0.51
Trav17A0A075B655 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav17A0A075B655 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Gm4459-201ENSMUST00000118750 468 ntBASIC11.84□□□□□ -0.51
Trav17A0A075B655 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.84□□□□□ -0.51
Trav17A0A075B655 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.84□□□□□ -0.51
Trav17A0A075B655 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav17A0A075B655 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.83□□□□□ -0.51
Trav17A0A075B655 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav17A0A075B655 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.83□□□□□ -0.52
Trav17A0A075B655 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.83□□□□□ -0.52
Trav17A0A075B655 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.83□□□□□ -0.52
Trav17A0A075B655 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.83□□□□□ -0.52
Trav17A0A075B655 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav17A0A075B655 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.83□□□□□ -0.52
Trav17A0A075B655 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.83□□□□□ -0.52
Trav17A0A075B655 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav17A0A075B655 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.83□□□□□ -0.52
Trav17A0A075B655 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.82□□□□□ -0.52
Trav17A0A075B655 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms