Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav16A0A075B653 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16A0A075B653 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav16A0A075B653 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.52□□□□□ -0.57
Trav16A0A075B653 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.52□□□□□ -0.57
Trav16A0A075B653 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.52□□□□□ -0.57
Trav16A0A075B653 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.52□□□□□ -0.57
Trav16A0A075B653 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav16A0A075B653 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trav16A0A075B653 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.51□□□□□ -0.57
Trav16A0A075B653 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav16A0A075B653 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Gm19164-201ENSMUST00000210667 640 ntBASIC11.51□□□□□ -0.57
Trav16A0A075B653 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.51□□□□□ -0.57
Trav16A0A075B653 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.51□□□□□ -0.57
Trav16A0A075B653 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16A0A075B653 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms