Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16nA0A075B634 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.27□□□□□ -0.6
Trav16nA0A075B634 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16nA0A075B634 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16nA0A075B634 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16nA0A075B634 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16nA0A075B634 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16nA0A075B634 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16nA0A075B634 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav16nA0A075B634 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16nA0A075B634 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Gm8344-201ENSMUST00000119813 856 ntBASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Gm23547-201ENSMUST00000158210 271 ntBASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Gm45328-201ENSMUST00000210942 917 ntBASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Gm18032-201ENSMUST00000222541 538 ntBASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16nA0A075B634 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Celf4-206ENSMUST00000224553 1729 ntBASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms