Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm12008-201ENSMUST00000117791 755 ntBASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm27867-201ENSMUST00000184778 125 ntBASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms