Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.96□□□□□ -0.65
Trav16d-dv11A0A075B617 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav16d-dv11A0A075B617 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Trav16d-dv11A0A075B617 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms