Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Matn2-206ENSMUST00000228570 2798 ntBASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav4n-4A0A075B615 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms