Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav7n-5A0A075B604 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Gm9385-201ENSMUST00000117563 472 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Gm25911-201ENSMUST00000157621 56 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-5A0A075B604 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Gm6736-201ENSMUST00000166583 948 ntBASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Gm27494-201ENSMUST00000184735 189 ntBASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-5A0A075B604 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-5A0A075B604 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-5A0A075B604 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-5A0A075B604 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-5A0A075B604 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms