Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Gm7461-201ENSMUST00000058918 827 ntBASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv4A0A075B5I2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Gm14140-201ENSMUST00000119999 995 ntBASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv4A0A075B5I2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms