Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Gm18733-201ENSMUST00000173950 856 ntBASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb2S4R1M3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Gm12008-201ENSMUST00000117791 755 ntBASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Gm7461-201ENSMUST00000058918 827 ntBASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb2S4R1M3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms