Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac6Q9Z2V5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Hdac6Q9Z2V5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac6Q9Z2V5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hdac6Q9Z2V5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac6Q9Z2V5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac6Q9Z2V5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Gm8602-201ENSMUST00000184045 607 ntBASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac6Q9Z2V5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Mir7085-201ENSMUST00000184353 66 ntBASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Gm9182-201ENSMUST00000217829 639 ntBASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac6Q9Z2V5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Hdac6Q9Z2V5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac6Q9Z2V5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Hdac6Q9Z2V5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac6Q9Z2V5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.53■□□□□ 0.56
Hdac6Q9Z2V5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.53■□□□□ 0.56
Hdac6Q9Z2V5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac6Q9Z2V5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms