Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh17Q9R100 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdh17Q9R100 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh17Q9R100 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh17Q9R100 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh17Q9R100 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh17Q9R100 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh17Q9R100 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh17Q9R100 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cdh17Q9R100 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh17Q9R100 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Gm15173-201ENSMUST00000122049 433 ntBASIC14.54□□□□□ -0.08
Cdh17Q9R100 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Gm21362-201ENSMUST00000194272 928 ntBASIC14.54□□□□□ -0.08
Cdh17Q9R100 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Gm6376-201ENSMUST00000209407 580 ntBASIC14.54□□□□□ -0.08
Cdh17Q9R100 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.54□□□□□ -0.08
Cdh17Q9R100 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.54□□□□□ -0.08
Cdh17Q9R100 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.54□□□□□ -0.08
Cdh17Q9R100 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdh17Q9R100 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Gm9103-201ENSMUST00000119371 405 ntBASIC14.53□□□□□ -0.08
Cdh17Q9R100 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Gm6550-201ENSMUST00000187574 993 ntBASIC14.53□□□□□ -0.08
Cdh17Q9R100 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Cdh17Q9R100 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.53□□□□□ -0.08
Cdh17Q9R100 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.53□□□□□ -0.08
Cdh17Q9R100 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdh17Q9R100 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.52□□□□□ -0.08
Cdh17Q9R100 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh17Q9R100 Gm24589-201ENSMUST00000116692 94 ntBASIC14.52□□□□□ -0.09
Cdh17Q9R100 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms