Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps29Q9QZ88 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps29Q9QZ88 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps29Q9QZ88 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps29Q9QZ88 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps29Q9QZ88 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Gm13036-201ENSMUST00000117799 748 ntBASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.28□□□□□ -0.12
Vps29Q9QZ88 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps29Q9QZ88 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps29Q9QZ88 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vps29Q9QZ88 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps29Q9QZ88 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps29Q9QZ88 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps29Q9QZ88 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Vps29Q9QZ88 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps29Q9QZ88 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vps29Q9QZ88 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Gm18195-201ENSMUST00000207604 706 ntBASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps29Q9QZ88 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Gm15590-201ENSMUST00000078419 552 ntBASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps29Q9QZ88 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps29Q9QZ88 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.25□□□□□ -0.13
Vps29Q9QZ88 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps29Q9QZ88 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps29Q9QZ88 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps29Q9QZ88 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.25□□□□□ -0.13
Vps29Q9QZ88 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Vps29Q9QZ88 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps29Q9QZ88 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps29Q9QZ88 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps29Q9QZ88 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms