Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Gm12008-201ENSMUST00000117791 755 ntBASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Gm13168-201ENSMUST00000121771 632 ntBASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim44Q9QXA7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim44Q9QXA7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trim44Q9QXA7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim44Q9QXA7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim44Q9QXA7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim44Q9QXA7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim44Q9QXA7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim44Q9QXA7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim44Q9QXA7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Gm7367-201ENSMUST00000057611 492 ntBASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim44Q9QXA7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Gm3375-201ENSMUST00000203929 796 ntBASIC17.25■□□□□ 0.35
Trim44Q9QXA7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.25■□□□□ 0.35
Trim44Q9QXA7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim44Q9QXA7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms