Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Gm15358-201ENSMUST00000119249 520 ntBASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1aQ9QWF0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chaf1aQ9QWF0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.71■□□□□ 0.26
Chaf1aQ9QWF0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.71■□□□□ 0.26
Chaf1aQ9QWF0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
Chaf1aQ9QWF0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Gm6296-201ENSMUST00000222599 943 ntBASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1aQ9QWF0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1aQ9QWF0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1aQ9QWF0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1aQ9QWF0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1aQ9QWF0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Chaf1aQ9QWF0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms