Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.39□□□□□ -0.27
Trem1Q9JKE2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trem1Q9JKE2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.38□□□□□ -0.27
Trem1Q9JKE2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Gm36967-201ENSMUST00000193814 266 ntBASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Timm23-208ENSMUST00000226683 750 ntBASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trem1Q9JKE2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Pck2-205ENSMUST00000226352 2784 ntBASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Gm18115-201ENSMUST00000221209 621 ntBASIC13.37□□□□□ -0.27
Trem1Q9JKE2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trem1Q9JKE2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms