Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl28Q9JIL2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl28Q9JIL2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl28Q9JIL2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl28Q9JIL2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl28Q9JIL2 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.07□□□□□ -0.48
Ccl28Q9JIL2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl28Q9JIL2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl28Q9JIL2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccl28Q9JIL2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl28Q9JIL2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Gm9103-201ENSMUST00000119371 405 ntBASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Gm11780-201ENSMUST00000136880 516 ntBASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl28Q9JIL2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Gm4535-201ENSMUST00000182274 558 ntBASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Gm10355-201ENSMUST00000097146 517 ntBASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl28Q9JIL2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms