Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Gm12260-201ENSMUST00000122447 411 ntBASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Gm15467-201ENSMUST00000120582 445 ntBASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Gm13597-201ENSMUST00000121239 375 ntBASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Vps35Q9EQH3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Mir8117-201ENSMUST00000184773 107 ntBASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Gm8000-201ENSMUST00000188378 592 ntBASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps35Q9EQH3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms