Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmgn3Q9DCB1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Gm6433-201ENSMUST00000118634 875 ntBASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Gm7507-201ENSMUST00000183053 1008 ntBASIC14□□□□□ -0.17
Hmgn3Q9DCB1 AC153881.2-201ENSMUST00000214877 204 ntBASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Mxra8os-201ENSMUST00000097740 687 ntBASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Gm43056-201ENSMUST00000197865 2791 ntBASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Gm6198-201ENSMUST00000191337 2929 ntBASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Gm9947-201ENSMUST00000067599 2920 ntBASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn3Q9DCB1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Matn2-206ENSMUST00000228570 2798 ntBASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Gm25406-201ENSMUST00000157599 105 ntBASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Gm27389-201ENSMUST00000183622 195 ntBASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Mir6982-201ENSMUST00000184354 68 ntBASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Gm9987-201ENSMUST00000069768 567 ntBASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms