Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Chmp4bQ9D8B3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Chmp4bQ9D8B3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Chmp4bQ9D8B3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chmp4bQ9D8B3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp4bQ9D8B3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Gm27741-201ENSMUST00000185060 237 ntBASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Chmp4bQ9D8B3 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Efs-202ENSMUST00000227037 2540 ntBASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp4bQ9D8B3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp4bQ9D8B3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms