Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Gm21451-201ENSMUST00000111062 2775 ntBASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp5Q9D7S9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp5Q9D7S9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Gm27646-201ENSMUST00000183989 110 ntBASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chmp5Q9D7S9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Chmp5Q9D7S9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chmp5Q9D7S9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Chmp5Q9D7S9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chmp5Q9D7S9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Chmp5Q9D7S9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp5Q9D7S9 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.64■□□□□ 0.57
Chmp5Q9D7S9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp5Q9D7S9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp5Q9D7S9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Chmp5Q9D7S9 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.64■□□□□ 0.57
Chmp5Q9D7S9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp5Q9D7S9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp5Q9D7S9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.64■□□□□ 0.57
Chmp5Q9D7S9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms