Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Rprl2-201ENSMUST00000157150 290 ntBASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lonrf3Q9D4H7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lonrf3Q9D4H7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Asic1-205ENSMUST00000228185 1818 ntBASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Mir6990-201ENSMUST00000183724 91 ntBASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Gm43474-201ENSMUST00000196415 774 ntBASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lonrf3Q9D4H7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Gm6973-201ENSMUST00000117080 721 ntBASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Gm43125-201ENSMUST00000201724 730 ntBASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lonrf3Q9D4H7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lonrf3Q9D4H7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms