Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Upk1aQ9D132 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk1aQ9D132 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Upk1aQ9D132 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk1aQ9D132 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk1aQ9D132 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Upk1aQ9D132 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk1aQ9D132 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Upk1aQ9D132 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk1aQ9D132 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Upk1aQ9D132 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Upk1aQ9D132 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Gm15372-201ENSMUST00000120729 834 ntBASIC14.14□□□□□ -0.15
Upk1aQ9D132 Gm10499-201ENSMUST00000174094 934 ntBASIC14.14□□□□□ -0.15
Upk1aQ9D132 Gm27357-201ENSMUST00000183754 135 ntBASIC14.14□□□□□ -0.15
Upk1aQ9D132 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.14□□□□□ -0.15
Upk1aQ9D132 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.14□□□□□ -0.15
Upk1aQ9D132 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk1aQ9D132 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Matn2-206ENSMUST00000228570 2798 ntBASIC14.13□□□□□ -0.15
Upk1aQ9D132 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Gm33142-201ENSMUST00000193913 867 ntBASIC14.13□□□□□ -0.15
Upk1aQ9D132 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.13□□□□□ -0.15
Upk1aQ9D132 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.13□□□□□ -0.15
Upk1aQ9D132 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk1aQ9D132 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms