Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.82□□□□□ -0.04
Lrrc40Q9CRC8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Gm18195-201ENSMUST00000207604 706 ntBASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.81□□□□□ -0.04
Lrrc40Q9CRC8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lrrc40Q9CRC8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lrrc40Q9CRC8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lrrc40Q9CRC8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.78□□□□□ -0.04
Lrrc40Q9CRC8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Lrrc40Q9CRC8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms